Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Gm15173-201ENSMUST00000122049 433 ntBASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ube4bQ9ES00 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Gm28659-201ENSMUST00000188013 759 ntBASIC13.24□□□□□ -0.29
Ube4bQ9ES00 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube4bQ9ES00 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Gm11452-201ENSMUST00000122376 690 ntBASIC13.23□□□□□ -0.29
Ube4bQ9ES00 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Gm10060-201ENSMUST00000212002 111 ntBASIC13.23□□□□□ -0.29
Ube4bQ9ES00 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.23□□□□□ -0.29
Ube4bQ9ES00 AV026068-213ENSMUST00000223675 1171 ntBASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms