Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Gm29741-201ENSMUST00000192667 421 ntBASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 AY702102-202ENSMUST00000194651 1173 ntBASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim54Q9ERP3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm27486-201ENSMUST00000184923 80 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm7287-201ENSMUST00000205267 602 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm9899-201ENSMUST00000065519 555 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim54Q9ERP3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Gm8652-201ENSMUST00000181363 964 ntBASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim54Q9ERP3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim54Q9ERP3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms