Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Gm16026-204ENSMUST00000162652 683 ntBASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Gm17971-201ENSMUST00000190239 806 ntBASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Gm2272-201ENSMUST00000194903 582 ntBASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgn3Q9DCB1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgn3Q9DCB1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Hmgn3Q9DCB1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgn3Q9DCB1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgn3Q9DCB1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgn3Q9DCB1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgn3Q9DCB1 Rubie-203ENSMUST00000227803 2430 ntBASIC12.96□□□□□ -0.34
Hmgn3Q9DCB1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgn3Q9DCB1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Gm15173-201ENSMUST00000122049 433 ntBASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Gm5479-201ENSMUST00000160578 435 ntBASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Gm6550-201ENSMUST00000187574 993 ntBASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Gm10819-201ENSMUST00000099988 561 ntBASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.94□□□□□ -0.34
Hmgn3Q9DCB1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms