Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssmem1Q9D9Y8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssmem1Q9D9Y8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssmem1Q9D9Y8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ssmem1Q9D9Y8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ssmem1Q9D9Y8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Gm27772-201ENSMUST00000184900 187 ntBASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ssmem1Q9D9Y8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssmem1Q9D9Y8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Ssmem1Q9D9Y8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms