Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Ndc80Q9D0F1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Gm14767-201ENSMUST00000121559 586 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Gm27680-201ENSMUST00000184192 160 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Gm6916-202ENSMUST00000205523 195 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Gm46209-201ENSMUST00000217912 553 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Gm6888-201ENSMUST00000221983 706 ntBASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ndc80Q9D0F1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms