Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Gm9385-201ENSMUST00000117563 472 ntBASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Gm12882-201ENSMUST00000121696 517 ntBASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.74□□□□□ -0.37
Trim13Q9CYB0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Trim13Q9CYB0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.73□□□□□ -0.37
Trim13Q9CYB0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Gm27920-201ENSMUST00000183953 96 ntBASIC12.73□□□□□ -0.37
Trim13Q9CYB0 AW822252-206ENSMUST00000208904 237 ntBASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim13Q9CYB0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms