Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Gm22018-201ENSMUST00000104357 131 ntBASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Gm13369-201ENSMUST00000119442 987 ntBASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Gm2445-201ENSMUST00000182798 989 ntBASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Gm38002-201ENSMUST00000193255 180 ntBASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nip7Q9CXK8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Gm14723-201ENSMUST00000118686 215 ntBASIC17.08■□□□□ 0.32
Nip7Q9CXK8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nip7Q9CXK8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Mir8109-201ENSMUST00000184375 117 ntBASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Gm37008-201ENSMUST00000195712 319 ntBASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nip7Q9CXK8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms