Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.23■□□□□ 0.19
Smc3Q9CW03 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.23■□□□□ 0.19
Smc3Q9CW03 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.23■□□□□ 0.19
Smc3Q9CW03 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.22■□□□□ 0.19
Smc3Q9CW03 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.22■□□□□ 0.19
Smc3Q9CW03 Gm44335-201ENSMUST00000196879 141 ntBASIC16.22■□□□□ 0.19
Smc3Q9CW03 Gm44297-201ENSMUST00000198304 141 ntBASIC16.22■□□□□ 0.19
Smc3Q9CW03 Gm44346-201ENSMUST00000198851 141 ntBASIC16.22■□□□□ 0.19
Smc3Q9CW03 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smc3Q9CW03 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smc3Q9CW03 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.21■□□□□ 0.19
Smc3Q9CW03 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Dupd1-202ENSMUST00000224735 548 ntBASIC16.21■□□□□ 0.19
Smc3Q9CW03 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Smc3Q9CW03 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.21■□□□□ 0.18
Smc3Q9CW03 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smc3Q9CW03 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smc3Q9CW03 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.21■□□□□ 0.18
Smc3Q9CW03 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smc3Q9CW03 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.2■□□□□ 0.18
Smc3Q9CW03 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Gm43474-201ENSMUST00000196415 774 ntBASIC16.2■□□□□ 0.18
Smc3Q9CW03 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.2■□□□□ 0.18
Smc3Q9CW03 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms