Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Gm7730-201ENSMUST00000212486 454 ntBASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Gm3436-201ENSMUST00000179930 840 ntBASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Mir125a-201ENSMUST00000083545 68 ntBASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.79□□□□□ -0.52
Sft2d3Q9CSV6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms