Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RTRAFQ9CQE8 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.2□□□□□ -0.62
RTRAFQ9CQE8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Gm27704-201ENSMUST00000185094 107 ntBASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms