Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.32□□□□□ -0.6
Prpf8Q99PV0 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.32□□□□□ -0.6
Prpf8Q99PV0 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Gm8598-201ENSMUST00000221184 836 ntBASIC11.32□□□□□ -0.6
Prpf8Q99PV0 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prpf8Q99PV0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm24644-201ENSMUST00000157114 139 ntBASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm7287-201ENSMUST00000205267 602 ntBASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm12485-201ENSMUST00000119641 291 ntBASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm21470-201ENSMUST00000187680 696 ntBASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prpf8Q99PV0 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Prpf8Q99PV0 Gm18827-201ENSMUST00000188341 790 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms