Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Gm7775-201ENSMUST00000218871 853 ntBASIC13.74□□□□□ -0.21
Trim33Q99PP7 Gm9229-201ENSMUST00000222777 126 ntBASIC13.74□□□□□ -0.21
Trim33Q99PP7 Gm9063-201ENSMUST00000223299 582 ntBASIC13.74□□□□□ -0.21
Trim33Q99PP7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.74□□□□□ -0.21
Trim33Q99PP7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim33Q99PP7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.73□□□□□ -0.21
Trim33Q99PP7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.73□□□□□ -0.21
Trim33Q99PP7 Gm27306-201ENSMUST00000183970 107 ntBASIC13.73□□□□□ -0.21
Trim33Q99PP7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Gm43703-201ENSMUST00000200523 763 ntBASIC13.73□□□□□ -0.21
Trim33Q99PP7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim33Q99PP7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.72□□□□□ -0.21
Trim33Q99PP7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Mir7023-201ENSMUST00000185093 64 ntBASIC13.72□□□□□ -0.21
Trim33Q99PP7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Gm33320-201ENSMUST00000192232 530 ntBASIC13.72□□□□□ -0.21
Trim33Q99PP7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.72□□□□□ -0.21
Trim33Q99PP7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Gm25007-201ENSMUST00000083808 133 ntBASIC13.72□□□□□ -0.21
Trim33Q99PP7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.72□□□□□ -0.21
Trim33Q99PP7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim33Q99PP7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim33Q99PP7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms