Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12616-201ENSMUST00000118594 382 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12208-201ENSMUST00000122004 163 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12624-201ENSMUST00000177615 382 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12621-201ENSMUST00000177760 382 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12615-201ENSMUST00000177970 382 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12622-201ENSMUST00000177975 382 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12627-201ENSMUST00000178412 382 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12625-201ENSMUST00000179122 382 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12614-201ENSMUST00000179586 382 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm12613-201ENSMUST00000180323 382 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm6458-201ENSMUST00000211573 635 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Gm8913-201ENSMUST00000209491 641 ntBASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh15Q99PJ1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh15Q99PJ1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Daam2-202ENSMUST00000224595 1926 ntBASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms