Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Gm8927-201ENSMUST00000181978 981 ntBASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Gm3222-201ENSMUST00000071282 990 ntBASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf2ird2Q99NI3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf2ird2Q99NI3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Gm8515-201ENSMUST00000194852 576 ntBASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Mir497b-201ENSMUST00000093601 125 ntBASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gtf2ird2Q99NI3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms