Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.1□□□□□ -0.47
Scrt1Q99M85 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.1□□□□□ -0.47
Scrt1Q99M85 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Gm45784-201ENSMUST00000188360 142 ntBASIC12.1□□□□□ -0.47
Scrt1Q99M85 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scrt1Q99M85 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.09□□□□□ -0.47
Scrt1Q99M85 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.09□□□□□ -0.47
Scrt1Q99M85 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.09□□□□□ -0.47
Scrt1Q99M85 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Gm14660-201ENSMUST00000119809 575 ntBASIC12.09□□□□□ -0.47
Scrt1Q99M85 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Gm27731-201ENSMUST00000185192 107 ntBASIC12.09□□□□□ -0.47
Scrt1Q99M85 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Gm9257-201ENSMUST00000221254 232 ntBASIC12.09□□□□□ -0.47
Scrt1Q99M85 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scrt1Q99M85 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Scrt1Q99M85 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Scrt1Q99M85 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Scrt1Q99M85 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms