Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Gm43125-201ENSMUST00000201724 730 ntBASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdk5rap3Q99LM2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Gm44719-201ENSMUST00000206404 149 ntBASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdk5rap3Q99LM2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Gm25925-201ENSMUST00000158314 306 ntBASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Gm6443-201ENSMUST00000203599 874 ntBASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Dupd1-202ENSMUST00000224735 548 ntBASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms