Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Gm15467-201ENSMUST00000120582 445 ntBASIC13.91□□□□□ -0.18
Cdk9Q99J95 Gm12260-201ENSMUST00000122447 411 ntBASIC13.91□□□□□ -0.18
Cdk9Q99J95 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Gm9727-201ENSMUST00000161387 555 ntBASIC13.91□□□□□ -0.18
Cdk9Q99J95 Gm10275-202ENSMUST00000168697 495 ntBASIC13.91□□□□□ -0.18
Cdk9Q99J95 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdk9Q99J95 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Gm10275-201ENSMUST00000092620 635 ntBASIC13.91□□□□□ -0.18
Cdk9Q99J95 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdk9Q99J95 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Gm16198-201ENSMUST00000118766 670 ntBASIC13.9□□□□□ -0.18
Cdk9Q99J95 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.9□□□□□ -0.18
Cdk9Q99J95 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Gm5264-201ENSMUST00000190584 848 ntBASIC13.9□□□□□ -0.18
Cdk9Q99J95 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdk9Q99J95 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk9Q99J95 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Cdk9Q99J95 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdk9Q99J95 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdk9Q99J95 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.89□□□□□ -0.19
Cdk9Q99J95 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms