Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Gm17968-201ENSMUST00000194902 784 ntBASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Chchd1-203ENSMUST00000224633 557 ntBASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb3Q91XZ7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Gm13333-201ENSMUST00000119424 781 ntBASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb3Q91XZ7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Gm28923-201ENSMUST00000187755 322 ntBASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb3Q91XZ7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms