Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb8Q91XZ2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Gm27430-201ENSMUST00000184585 107 ntBASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Gm44333-201ENSMUST00000197168 107 ntBASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb8Q91XZ2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb8Q91XZ2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms