Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga6Q91XY2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga6Q91XY2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhga6Q91XY2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga6Q91XY2 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.78□□□□□ -0.2
Pcdhga6Q91XY2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga6Q91XY2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga6Q91XY2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga6Q91XY2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga6Q91XY2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga6Q91XY2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.77□□□□□ -0.2
Pcdhga6Q91XY2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pcdhga6Q91XY2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 BC001981-202ENSMUST00000191393 1545 ntBASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.77□□□□□ -0.21
Pcdhga6Q91XY2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Acot6-202ENSMUST00000222921 3622 ntBASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhga6Q91XY2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Gm4804-201ENSMUST00000182234 999 ntBASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Gm27847-201ENSMUST00000183711 107 ntBASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Gm27375-201ENSMUST00000183799 107 ntBASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Gm18827-201ENSMUST00000188341 790 ntBASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Gm17795-201ENSMUST00000214505 757 ntBASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhga6Q91XY2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms