Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx1Q91V10 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.62□□□□□ -0.23
Vsx1Q91V10 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm11803-201ENSMUST00000119966 444 ntBASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm16570-201ENSMUST00000161951 436 ntBASIC13.62□□□□□ -0.23
Vsx1Q91V10 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm38002-201ENSMUST00000193255 180 ntBASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm7783-201ENSMUST00000204795 781 ntBASIC13.62□□□□□ -0.23
Vsx1Q91V10 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm6983-201ENSMUST00000214912 628 ntBASIC13.62□□□□□ -0.23
Vsx1Q91V10 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx1Q91V10 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.61□□□□□ -0.23
Vsx1Q91V10 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.61□□□□□ -0.23
Vsx1Q91V10 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.61□□□□□ -0.23
Vsx1Q91V10 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Gm27501-201ENSMUST00000183599 107 ntBASIC13.61□□□□□ -0.23
Vsx1Q91V10 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Vsx1Q91V10 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.61□□□□□ -0.23
Vsx1Q91V10 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vsx1Q91V10 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx1Q91V10 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vsx1Q91V10 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx1Q91V10 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Vsx1Q91V10 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx1Q91V10 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx1Q91V10 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx1Q91V10 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx1Q91V10 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.6□□□□□ -0.23
Vsx1Q91V10 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx1Q91V10 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms