Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.88□□□□□ -0.51
Tram1Q91V04 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.87□□□□□ -0.51
Tram1Q91V04 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.87□□□□□ -0.51
Tram1Q91V04 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tram1Q91V04 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.87□□□□□ -0.51
Tram1Q91V04 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tram1Q91V04 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tram1Q91V04 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.87□□□□□ -0.51
Tram1Q91V04 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.87□□□□□ -0.51
Tram1Q91V04 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Tram1Q91V04 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tram1Q91V04 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.87□□□□□ -0.51
Tram1Q91V04 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tram1Q91V04 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.86□□□□□ -0.51
Tram1Q91V04 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Gm15957-201ENSMUST00000118893 974 ntBASIC11.86□□□□□ -0.51
Tram1Q91V04 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.86□□□□□ -0.51
Tram1Q91V04 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.86□□□□□ -0.51
Tram1Q91V04 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.86□□□□□ -0.51
Tram1Q91V04 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.86□□□□□ -0.51
Tram1Q91V04 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.86□□□□□ -0.51
Tram1Q91V04 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Gm18669-201ENSMUST00000216049 778 ntBASIC11.86□□□□□ -0.51
Tram1Q91V04 AV026068-213ENSMUST00000223675 1171 ntBASIC11.86□□□□□ -0.51
Tram1Q91V04 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Rps4l-201ENSMUST00000071745 943 ntBASIC11.86□□□□□ -0.51
Tram1Q91V04 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tram1Q91V04 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Tram1Q91V04 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tram1Q91V04 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms