Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 AU022133-201ENSMUST00000200601 873 ntBASIC16.03■□□□□ 0.16
StrcQ8VIM6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.03■□□□□ 0.16
StrcQ8VIM6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Gm12208-201ENSMUST00000122004 163 ntBASIC16.02■□□□□ 0.16
StrcQ8VIM6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.02■□□□□ 0.16
StrcQ8VIM6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
StrcQ8VIM6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.02■□□□□ 0.15
StrcQ8VIM6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
StrcQ8VIM6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
StrcQ8VIM6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.02■□□□□ 0.15
StrcQ8VIM6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
StrcQ8VIM6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
StrcQ8VIM6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm8712-201ENSMUST00000221090 701 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Daam2-202ENSMUST00000224595 1926 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm12616-201ENSMUST00000118594 382 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm8566-201ENSMUST00000120174 465 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm23699-201ENSMUST00000158835 135 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm12624-201ENSMUST00000177615 382 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm12621-201ENSMUST00000177760 382 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm12615-201ENSMUST00000177970 382 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm12622-201ENSMUST00000177975 382 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm12627-201ENSMUST00000178412 382 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm12625-201ENSMUST00000179122 382 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm12614-201ENSMUST00000179586 382 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm12613-201ENSMUST00000180323 382 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm44551-201ENSMUST00000208804 171 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
StrcQ8VIM6 Gm22058-201ENSMUST00000083393 310 ntBASIC16.01■□□□□ 0.15
StrcQ8VIM6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Gm43081-201ENSMUST00000199082 1380 ntBASIC16■□□□□ 0.15
StrcQ8VIM6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
StrcQ8VIM6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16■□□□□ 0.15
StrcQ8VIM6 Gm14371-201ENSMUST00000138925 1518 ntBASIC16■□□□□ 0.15
StrcQ8VIM6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
StrcQ8VIM6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms