Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh18Q8VHR0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh18Q8VHR0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Pcdh18Q8VHR0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Pcdh18Q8VHR0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Gm17968-201ENSMUST00000194902 784 ntBASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Gm45098-201ENSMUST00000207179 657 ntBASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh18Q8VHR0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh18Q8VHR0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Gm12260-201ENSMUST00000122447 411 ntBASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms