Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Gm18733-201ENSMUST00000173950 856 ntBASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Gm19324-201ENSMUST00000213229 1169 ntBASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Gm45925-201ENSMUST00000218882 744 ntBASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Gm7461-201ENSMUST00000058918 827 ntBASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Gm15483-201ENSMUST00000120338 456 ntBASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rpa1Q8VEE4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Mir5131-201ENSMUST00000175426 93 ntBASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rpa1Q8VEE4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rpa1Q8VEE4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rpa1Q8VEE4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms