Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Nup85Q8R480 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nup85Q8R480 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Nup85Q8R480 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.21□□□□□ -0.13
Nup85Q8R480 Gm4875-201ENSMUST00000118257 786 ntBASIC14.21□□□□□ -0.13
Nup85Q8R480 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup85Q8R480 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup85Q8R480 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nup85Q8R480 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nup85Q8R480 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup85Q8R480 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup85Q8R480 Syt7-205ENSMUST00000224135 1557 ntBASIC14.21□□□□□ -0.14
Nup85Q8R480 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup85Q8R480 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup85Q8R480 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup85Q8R480 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nup85Q8R480 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nup85Q8R480 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup85Q8R480 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup85Q8R480 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup85Q8R480 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Nup85Q8R480 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nup85Q8R480 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Gm15321-201ENSMUST00000121290 288 ntBASIC14.2□□□□□ -0.14
Nup85Q8R480 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.2□□□□□ -0.14
Nup85Q8R480 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.2□□□□□ -0.14
Nup85Q8R480 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Gm9229-201ENSMUST00000222777 126 ntBASIC14.2□□□□□ -0.14
Nup85Q8R480 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.2□□□□□ -0.14
Nup85Q8R480 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nup85Q8R480 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.2□□□□□ -0.14
Nup85Q8R480 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Nup85Q8R480 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Nup85Q8R480 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup85Q8R480 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nup85Q8R480 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup85Q8R480 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Nup85Q8R480 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Nup85Q8R480 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.19□□□□□ -0.14
Nup85Q8R480 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup85Q8R480 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup85Q8R480 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Nup85Q8R480 Gm29667-201ENSMUST00000190817 490 ntBASIC14.19□□□□□ -0.14
Nup85Q8R480 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup85Q8R480 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nup85Q8R480 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup85Q8R480 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms