Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd109Q8R422 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd109Q8R422 AC139350.1-201ENSMUST00000227064 1594 ntBASIC19.38■□□□□ 0.69
Cd109Q8R422 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.37■□□□□ 0.69
Cd109Q8R422 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Gm44069-201ENSMUST00000204898 506 ntBASIC19.37■□□□□ 0.69
Cd109Q8R422 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Gm16372-201ENSMUST00000073088 450 ntBASIC19.37■□□□□ 0.69
Cd109Q8R422 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cd109Q8R422 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cd109Q8R422 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd109Q8R422 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cd109Q8R422 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Cd109Q8R422 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC19.36■□□□□ 0.69
Cd109Q8R422 Gm25927-201ENSMUST00000175058 117 ntBASIC19.36■□□□□ 0.69
Cd109Q8R422 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC19.36■□□□□ 0.69
Cd109Q8R422 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC19.36■□□□□ 0.69
Cd109Q8R422 Gm4935-201ENSMUST00000221316 1198 ntBASIC19.36■□□□□ 0.69
Cd109Q8R422 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cd109Q8R422 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cd109Q8R422 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC19.36■□□□□ 0.69
Cd109Q8R422 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd109Q8R422 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC19.35■□□□□ 0.69
Cd109Q8R422 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC19.35■□□□□ 0.69
Cd109Q8R422 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Cd109Q8R422 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Cd109Q8R422 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC19.35■□□□□ 0.69
Cd109Q8R422 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC19.35■□□□□ 0.69
Cd109Q8R422 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC19.35■□□□□ 0.69
Cd109Q8R422 AC140406.1-201ENSMUST00000226481 465 ntBASIC19.35■□□□□ 0.69
Cd109Q8R422 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.35■□□□□ 0.69
Cd109Q8R422 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cd109Q8R422 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC19.35■□□□□ 0.69
Cd109Q8R422 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Gm43697-201ENSMUST00000199637 2581 ntBASIC19.35■□□□□ 0.69
Cd109Q8R422 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd109Q8R422 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cd109Q8R422 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.34■□□□□ 0.69
Cd109Q8R422 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC19.34■□□□□ 0.69
Cd109Q8R422 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Gm5850-201ENSMUST00000192923 1206 ntBASIC19.34■□□□□ 0.69
Cd109Q8R422 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC19.34■□□□□ 0.69
Cd109Q8R422 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC19.34■□□□□ 0.69
Cd109Q8R422 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Cd109Q8R422 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Gm12500-202ENSMUST00000186471 2428 ntBASIC19.34■□□□□ 0.69
Cd109Q8R422 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd109Q8R422 Nupl1-207ENSMUST00000225311 2475 ntBASIC19.34■□□□□ 0.69
Cd109Q8R422 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms