Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Gm12138-201ENSMUST00000122180 951 ntBASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Rpp40Q8R1F9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Gm7653-201ENSMUST00000214567 508 ntBASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpp40Q8R1F9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Gm45384-201ENSMUST00000210451 277 ntBASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rpp40Q8R1F9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms