Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.1□□□□□ -0.15
CopaQ8CIE6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.1□□□□□ -0.15
CopaQ8CIE6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Gm9229-201ENSMUST00000222777 126 ntBASIC14.1□□□□□ -0.15
CopaQ8CIE6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CopaQ8CIE6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.09□□□□□ -0.15
CopaQ8CIE6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.09□□□□□ -0.15
CopaQ8CIE6 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.09□□□□□ -0.15
CopaQ8CIE6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.09□□□□□ -0.15
CopaQ8CIE6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopaQ8CIE6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.08□□□□□ -0.15
CopaQ8CIE6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CopaQ8CIE6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CopaQ8CIE6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CopaQ8CIE6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.08□□□□□ -0.15
CopaQ8CIE6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms