Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox30Q8CGW4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sox30Q8CGW4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Sox30Q8CGW4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sox30Q8CGW4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox30Q8CGW4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sox30Q8CGW4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sox30Q8CGW4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.08■□□□□ 0
Sox30Q8CGW4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Mir6990-201ENSMUST00000183724 91 ntBASIC15.08■□□□□ 0
Sox30Q8CGW4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.08■□□□□ 0
Sox30Q8CGW4 Gm33320-201ENSMUST00000192232 530 ntBASIC15.08■□□□□ 0
Sox30Q8CGW4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.08■□□□□ 0
Sox30Q8CGW4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.08■□□□□ 0
Sox30Q8CGW4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sox30Q8CGW4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Sox30Q8CGW4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox30Q8CGW4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.07■□□□□ 0
Sox30Q8CGW4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Gm15460-201ENSMUST00000118147 391 ntBASIC15.07■□□□□ 0
Sox30Q8CGW4 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.07■□□□□ 0
Sox30Q8CGW4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Gm8927-201ENSMUST00000181978 981 ntBASIC15.07■□□□□ 0
Sox30Q8CGW4 Gm21470-201ENSMUST00000187680 696 ntBASIC15.07■□□□□ 0
Sox30Q8CGW4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Gm3222-201ENSMUST00000071282 990 ntBASIC15.07■□□□□ 0
Sox30Q8CGW4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Sox30Q8CGW4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox30Q8CGW4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.06■□□□□ 0
Sox30Q8CGW4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.06■□□□□ 0
Sox30Q8CGW4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.06■□□□□ 0
Sox30Q8CGW4 Gm13385-201ENSMUST00000121089 220 ntBASIC15.06■□□□□ 0
Sox30Q8CGW4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.06■□□□□ 0
Sox30Q8CGW4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.06■□□□□ 0
Sox30Q8CGW4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.06■□□□□ 0
Sox30Q8CGW4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox30Q8CGW4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms