Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Gm15678-201ENSMUST00000117573 960 ntBASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Gm15806-201ENSMUST00000120696 955 ntBASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Mir7654-201ENSMUST00000185082 70 ntBASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rbm28Q8CGC6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Gm8584-201ENSMUST00000171982 758 ntBASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Gm8602-201ENSMUST00000184045 607 ntBASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Gm18905-201ENSMUST00000205454 928 ntBASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rbm28Q8CGC6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Gm28911-201ENSMUST00000188837 117 ntBASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbm28Q8CGC6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbm28Q8CGC6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbm28Q8CGC6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbm28Q8CGC6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbm28Q8CGC6 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.28■□□□□ 0.2
Rbm28Q8CGC6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbm28Q8CGC6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms