Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm27631-201ENSMUST00000184163 466 ntBASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Gm43703-201ENSMUST00000200523 763 ntBASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Dupd1-202ENSMUST00000224735 548 ntBASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup88Q8CEC0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.29■□□□□ 0.2
Nup88Q8CEC0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup88Q8CEC0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.28■□□□□ 0.2
Nup88Q8CEC0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Gm6222-201ENSMUST00000120787 396 ntBASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.28■□□□□ 0.2
Nup88Q8CEC0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.27■□□□□ 0.2
Nup88Q8CEC0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Gm46209-201ENSMUST00000217912 553 ntBASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms