Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc17Q8CE13 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc17Q8CE13 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc17Q8CE13 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.32□□□□□ -0.12
Ccdc17Q8CE13 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc17Q8CE13 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc17Q8CE13 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc17Q8CE13 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gm13226-201ENSMUST00000117838 404 ntBASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gm15957-201ENSMUST00000118893 974 ntBASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gm17420-201ENSMUST00000164753 153 ntBASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gm42693-201ENSMUST00000196779 631 ntBASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc17Q8CE13 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Gm15429-201ENSMUST00000151268 798 ntBASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc17Q8CE13 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Gm8652-201ENSMUST00000181363 964 ntBASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Gm10478-201ENSMUST00000084451 396 ntBASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms