Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Gm15957-201ENSMUST00000118893 974 ntBASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Gm7774-201ENSMUST00000200064 533 ntBASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccdc87Q8CDL9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Ccdc87Q8CDL9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Ccdc87Q8CDL9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Ccdc87Q8CDL9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm25287-201ENSMUST00000103846 110 ntBASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm22918-201ENSMUST00000103855 110 ntBASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm10253-201ENSMUST00000194270 940 ntBASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc87Q8CDL9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms