Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Gm24158-201ENSMUST00000175263 71 ntBASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Mir125a-201ENSMUST00000083545 68 ntBASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.85□□□□□ -0.03
Vcpip1Q8CDG3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vcpip1Q8CDG3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vcpip1Q8CDG3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vcpip1Q8CDG3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vcpip1Q8CDG3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vcpip1Q8CDG3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
Vcpip1Q8CDG3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vcpip1Q8CDG3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Gm22175-201ENSMUST00000175007 78 ntBASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms