Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm2495-201ENSMUST00000191160 466 ntBASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Gm38144-201ENSMUST00000192790 465 ntBASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Gm38223-201ENSMUST00000194484 695 ntBASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alx1Q8C8B0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Gm12138-201ENSMUST00000122180 951 ntBASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx1Q8C8B0 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.03■□□□□ 0.16
Alx1Q8C8B0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.03■□□□□ 0.16
Alx1Q8C8B0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Gm6983-201ENSMUST00000214912 628 ntBASIC16.03■□□□□ 0.16
Alx1Q8C8B0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx1Q8C8B0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alx1Q8C8B0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Gm15371-201ENSMUST00000117057 784 ntBASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Gm15429-201ENSMUST00000151268 798 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms