Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Lin9Q8C735 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.1■□□□□ 0.01
Lin9Q8C735 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.1■□□□□ 0.01
Lin9Q8C735 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.1■□□□□ 0.01
Lin9Q8C735 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.1■□□□□ 0.01
Lin9Q8C735 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lin9Q8C735 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin9Q8C735 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.09■□□□□ 0.01
Lin9Q8C735 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.09■□□□□ 0.01
Lin9Q8C735 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.09■□□□□ 0.01
Lin9Q8C735 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lin9Q8C735 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Lin9Q8C735 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.09■□□□□ 0.01
Lin9Q8C735 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.09■□□□□ 0.01
Lin9Q8C735 Gm18027-201ENSMUST00000218947 619 ntBASIC15.09■□□□□ 0.01
Lin9Q8C735 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Lin9Q8C735 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lin9Q8C735 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.09■□□□□ 0.01
Lin9Q8C735 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lin9Q8C735 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Lin9Q8C735 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lin9Q8C735 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lin9Q8C735 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lin9Q8C735 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lin9Q8C735 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Gm12490-201ENSMUST00000120255 560 ntBASIC15.08■□□□□ 0
Lin9Q8C735 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.08■□□□□ 0
Lin9Q8C735 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.08■□□□□ 0
Lin9Q8C735 Gm6916-202ENSMUST00000205523 195 ntBASIC15.08■□□□□ 0
Lin9Q8C735 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.08■□□□□ 0
Lin9Q8C735 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.08■□□□□ 0
Lin9Q8C735 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.08■□□□□ 0
Lin9Q8C735 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lin9Q8C735 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lin9Q8C735 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.08■□□□□ 0
Lin9Q8C735 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lin9Q8C735 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lin9Q8C735 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Lin9Q8C735 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lin9Q8C735 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.08■□□□□ 0
Lin9Q8C735 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Lin9Q8C735 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lin9Q8C735 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lin9Q8C735 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lin9Q8C735 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms