Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Cts7-204ENSMUST00000225321 1257 ntBASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a6Q8C6K9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Gm22323-201ENSMUST00000103832 109 ntBASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a6Q8C6K9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms