Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Gm5425-201ENSMUST00000214125 459 ntBASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.23□□□□□ -0.13
Trub1Q8C0D0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Gm15240-201ENSMUST00000118156 720 ntBASIC14.22□□□□□ -0.13
Trub1Q8C0D0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms