Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.18□□□□□ -0.46
SprnQ8BWU1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Gm10576-201ENSMUST00000191927 825 ntBASIC12.17□□□□□ -0.46
SprnQ8BWU1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.17□□□□□ -0.46
SprnQ8BWU1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.17□□□□□ -0.46
SprnQ8BWU1 Gm20553-201ENSMUST00000204205 844 ntBASIC12.17□□□□□ -0.46
SprnQ8BWU1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.17□□□□□ -0.46
SprnQ8BWU1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SprnQ8BWU1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.17□□□□□ -0.46
SprnQ8BWU1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.17□□□□□ -0.46
SprnQ8BWU1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SprnQ8BWU1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.16□□□□□ -0.46
SprnQ8BWU1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.16□□□□□ -0.46
SprnQ8BWU1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.16□□□□□ -0.46
SprnQ8BWU1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.16□□□□□ -0.46
SprnQ8BWU1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.16□□□□□ -0.46
SprnQ8BWU1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.16□□□□□ -0.46
SprnQ8BWU1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.16□□□□□ -0.46
SprnQ8BWU1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SprnQ8BWU1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms