Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm12485-201ENSMUST00000119641 291 ntBASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm26464-201ENSMUST00000157094 305 ntBASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap1Q8BTW8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm15376-201ENSMUST00000122258 783 ntBASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm2445-201ENSMUST00000182798 989 ntBASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms