Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm12403-201ENSMUST00000121384 959 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm6152-201ENSMUST00000151704 340 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scfd1Q8BRF7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Gm5687-201ENSMUST00000118252 640 ntBASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Gm29649-201ENSMUST00000185649 419 ntBASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Gm29608-201ENSMUST00000190444 463 ntBASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Scfd1Q8BRF7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scfd1Q8BRF7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scfd1Q8BRF7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scfd1Q8BRF7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scfd1Q8BRF7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Scfd1Q8BRF7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.1
Scfd1Q8BRF7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scfd1Q8BRF7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scfd1Q8BRF7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms