Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Gm27989-201ENSMUST00000184721 107 ntBASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Gm16476-201ENSMUST00000221544 139 ntBASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Gm9063-201ENSMUST00000223299 582 ntBASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.41□□□□□ -0.26
Cpsf4Q8BQZ5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Gm45453-201ENSMUST00000211758 853 ntBASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpsf4Q8BQZ5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cpsf4Q8BQZ5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Gm27680-201ENSMUST00000184192 160 ntBASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Gm44344-201ENSMUST00000200287 129 ntBASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Gm7775-201ENSMUST00000218871 853 ntBASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms