Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco3Q8BQM7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smco3Q8BQM7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.38□□□□□ -0.59
Smco3Q8BQM7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Gm4899-201ENSMUST00000178708 719 ntBASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco3Q8BQM7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.36□□□□□ -0.59
Smco3Q8BQM7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Gm6550-201ENSMUST00000187574 993 ntBASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Smco3Q8BQM7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Gm45098-201ENSMUST00000207179 657 ntBASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Gm18669-201ENSMUST00000216049 778 ntBASIC11.35□□□□□ -0.59
Smco3Q8BQM7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms