Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 AC113441.2-201ENSMUST00000221538 1468 ntBASIC19.25■□□□□ 0.67
Usp54Q8BL06 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.25■□□□□ 0.67
Usp54Q8BL06 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC19.25■□□□□ 0.67
Usp54Q8BL06 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Gm45186-201ENSMUST00000206874 478 ntBASIC19.24■□□□□ 0.67
Usp54Q8BL06 Gm9445-201ENSMUST00000207454 1285 ntBASIC19.24■□□□□ 0.67
Usp54Q8BL06 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Gm30285-201ENSMUST00000214614 422 ntBASIC19.24■□□□□ 0.67
Usp54Q8BL06 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp54Q8BL06 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Gm12012-201ENSMUST00000118857 1066 ntBASIC19.23■□□□□ 0.67
Usp54Q8BL06 Gm12539-201ENSMUST00000121549 1098 ntBASIC19.23■□□□□ 0.67
Usp54Q8BL06 Rps4l-202ENSMUST00000204242 789 ntBASIC19.23■□□□□ 0.67
Usp54Q8BL06 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC19.23■□□□□ 0.67
Usp54Q8BL06 n-R5s77-201ENSMUST00000083757 119 ntBASIC19.23■□□□□ 0.67
Usp54Q8BL06 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp54Q8BL06 Mmp14-206ENSMUST00000225641 3238 ntBASIC19.23■□□□□ 0.67
Usp54Q8BL06 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Gm15897-201ENSMUST00000117770 1486 ntBASIC19.22■□□□□ 0.67
Usp54Q8BL06 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Gm25668-201ENSMUST00000157700 129 ntBASIC19.22■□□□□ 0.67
Usp54Q8BL06 Gm8738-201ENSMUST00000172606 329 ntBASIC19.22■□□□□ 0.67
Usp54Q8BL06 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Gm5363-201ENSMUST00000211927 938 ntBASIC19.22■□□□□ 0.67
Usp54Q8BL06 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Usp54Q8BL06 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Gm24830-201ENSMUST00000102024 166 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms