Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Gm13616-201ENSMUST00000120600 222 ntBASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn3Q8BHH8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Clrn3Q8BHH8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13□□□□□ -0.33
Clrn3Q8BHH8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Gm42706-201ENSMUST00000199733 1910 ntBASIC13□□□□□ -0.33
Clrn3Q8BHH8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Clrn3Q8BHH8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Gm27533-201ENSMUST00000183800 152 ntBASIC13□□□□□ -0.33
Clrn3Q8BHH8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13□□□□□ -0.33
Clrn3Q8BHH8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn3Q8BHH8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Acot6-202ENSMUST00000222921 3622 ntBASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms