Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Gm15653-201ENSMUST00000119247 907 ntBASIC15.03■□□□□ -0
Depdc1bQ8BH88 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Depdc1bQ8BH88 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.02■□□□□ -0
Depdc1bQ8BH88 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Dupd1-202ENSMUST00000224735 548 ntBASIC15.02■□□□□ -0
Depdc1bQ8BH88 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.02■□□□□ -0
Depdc1bQ8BH88 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.02■□□□□ -0
Depdc1bQ8BH88 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.02■□□□□ -0
Depdc1bQ8BH88 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Depdc1bQ8BH88 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Depdc1bQ8BH88 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Depdc1bQ8BH88 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Depdc1bQ8BH88 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Depdc1bQ8BH88 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Depdc1bQ8BH88 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Depdc1bQ8BH88 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.02□□□□□ -0.01
Depdc1bQ8BH88 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Syt7-204ENSMUST00000223586 1344 ntBASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Gm7488-201ENSMUST00000117148 684 ntBASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Mir1897-201ENSMUST00000122581 272 ntBASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Depdc1bQ8BH88 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Gm16215-201ENSMUST00000161990 637 ntBASIC15□□□□□ -0.01
Depdc1bQ8BH88 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Gm5745-201ENSMUST00000183748 313 ntBASIC15□□□□□ -0.01
Depdc1bQ8BH88 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 CT030704.2-201ENSMUST00000228887 494 ntBASIC15□□□□□ -0.01
Depdc1bQ8BH88 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15□□□□□ -0.01
Depdc1bQ8BH88 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms