Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc5a7Q8BGY9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Slc5a7Q8BGY9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Slc5a7Q8BGY9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Slc5a7Q8BGY9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Gm14859-201ENSMUST00000117752 357 ntBASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Gm44608-201ENSMUST00000206827 855 ntBASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc5a7Q8BGY9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Syt7-205ENSMUST00000224135 1557 ntBASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc5a7Q8BGY9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc5a7Q8BGY9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms