Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.64□□□□□ -0.23
Ubp1Q811S7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.64□□□□□ -0.23
Ubp1Q811S7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.63□□□□□ -0.23
Ubp1Q811S7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.63□□□□□ -0.23
Ubp1Q811S7 Gm20445-201ENSMUST00000061905 565 ntBASIC13.63□□□□□ -0.23
Ubp1Q811S7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Syt7-204ENSMUST00000223586 1344 ntBASIC13.63□□□□□ -0.23
Ubp1Q811S7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubp1Q811S7 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.63□□□□□ -0.23
Ubp1Q811S7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.62□□□□□ -0.23
Ubp1Q811S7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Ubp1Q811S7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Gm16215-201ENSMUST00000161990 637 ntBASIC13.62□□□□□ -0.23
Ubp1Q811S7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Gm29741-201ENSMUST00000192667 421 ntBASIC13.62□□□□□ -0.23
Ubp1Q811S7 Gm10766-202ENSMUST00000194123 606 ntBASIC13.62□□□□□ -0.23
Ubp1Q811S7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubp1Q811S7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms