Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp8Q80U87 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp8Q80U87 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp8Q80U87 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.88□□□□□ -0.19
Usp8Q80U87 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.88□□□□□ -0.19
Usp8Q80U87 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Usp8Q80U87 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.88□□□□□ -0.19
Usp8Q80U87 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Usp8Q80U87 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.88□□□□□ -0.19
Usp8Q80U87 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.88□□□□□ -0.19
Usp8Q80U87 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Usp8Q80U87 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp8Q80U87 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Usp8Q80U87 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp8Q80U87 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp8Q80U87 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.88□□□□□ -0.19
Usp8Q80U87 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp8Q80U87 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp8Q80U87 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Gm6222-201ENSMUST00000120787 396 ntBASIC13.87□□□□□ -0.19
Usp8Q80U87 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Gm18049-201ENSMUST00000208909 581 ntBASIC13.87□□□□□ -0.19
Usp8Q80U87 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.87□□□□□ -0.19
Usp8Q80U87 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.87□□□□□ -0.19
Usp8Q80U87 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp8Q80U87 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.86□□□□□ -0.19
Usp8Q80U87 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.86□□□□□ -0.19
Usp8Q80U87 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Usp8Q80U87 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Gm13015-201ENSMUST00000118674 204 ntBASIC13.86□□□□□ -0.19
Usp8Q80U87 Gm15957-201ENSMUST00000118893 974 ntBASIC13.86□□□□□ -0.19
Usp8Q80U87 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.86□□□□□ -0.19
Usp8Q80U87 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Gm9824-201ENSMUST00000178707 561 ntBASIC13.86□□□□□ -0.19
Usp8Q80U87 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.86□□□□□ -0.19
Usp8Q80U87 AA619741-201ENSMUST00000195095 646 ntBASIC13.86□□□□□ -0.19
Usp8Q80U87 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.86□□□□□ -0.19
Usp8Q80U87 Gm44608-201ENSMUST00000206827 855 ntBASIC13.86□□□□□ -0.19
Usp8Q80U87 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Usp8Q80U87 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.86□□□□□ -0.19
Usp8Q80U87 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp8Q80U87 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.85□□□□□ -0.19
Usp8Q80U87 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.85□□□□□ -0.19
Usp8Q80U87 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms